CDS

Accession Number TCMCG073C40483
gbkey CDS
Protein Id XP_010526823.1
Location join(3721213..3721296,3721550..3721813,3721992..3722291,3722374..3722532,3722680..3722841,3722928..3723148,3723231..3723372,3723466..3723801,3723890..3724176,3724298..3724556,3724639..3727700,3727821..3727892,3727992..3728154)
Gene LOC104804281
GeneID 104804281
Organism Tarenaya hassleriana

Protein

Length 1836aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010528521.1
Definition PREDICTED: DNA-directed RNA polymerase II subunit 1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03006        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005665        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACTCGGTTTCCGTTTTCTCCGGCGGAGGTGGCCAAAGTCCGGGTGGTTCAGTTTGGCATAGTCAGCCCGGATGAAATCAGACAAATGTCGGTTGTACATATTGAGCATAGTGAGACTACCGAGAAGGGAAAACCGAAGATTGGAGGACTGAGTGATCCTCGGCTTGGTACCATTGATCGGAAGGTGAAGTGTGAGACGTGTATGGCTAACATGGCTGAGTGCTCGGGGCACTTTGGCCATCTCGAGCTCGCCAAGCCGATGTTTCATGTCGGTTTCTTGAAGATCGTGTTGAGTATCATGCGATGCGTTTGCTTCAATTGCTCCAAAATTTTAGCTGACGAGGAGGACCATAAATTTAAGCAGGCTTTGAAGATAAAGAATCCCAAAAACAGGCTTAAGAAGATTTTAGATGCCTGCAAAAACAAGACCAAATGTGAAGGTGGTGATGAAATTGATGTCCACAACCAAGACACAGACGAACCAGTTAAAAAAAGCCGTGGTGGGTGTGGTGCTCAGCAGCCAAAGCTGACTATTGAAGGTATGAAAATGATTGCTGAGTATAAAGCTCAAAGGAAGAAGAATGATGATCAGGACCAGCTTCCTGAGCCAGCAGAAAGGAAACAGACACTTGGTGCTGATAGGGTTTTGAGTGTTTTAAAGAGGATTAGTGACGAGGATTGCCAGCTCTTAGGGTTTAACCCTAAGTATGCTCGTCCTGACTGGATGATTCTACAAGTCCTTCCTATTCCTCCGCCTCCTGTGAGGCCCTCTGTGATGATGGATGCCACTGCCAGGAGTGAGGATGATTTGACTCATCAGTTAGCGATGATTATTCGGCACAACGAAAACTTGAAAAAACAAGAAAAAAATGGGGCACCGGCACATATTATATCAGAGTTCACACAACTCTTGCAGTTTCATATTGCAACATATTTTGATAACGAGTTGCCTGGACAGCCAAGGGCTACTCAAAAATCAGGGAGGCCCATCAAATCAATTTGCAGTAGGCTTAAGGCAAAGGAAGGCAGGATCAGGGGAAACTTGATGGGGAAGCGTGTCGATTTCTCTGCACGAACTGTTATCACACCAGATCCTACAATTAATATTGATGAACTTGGTGTACCATGGAGTATCGCTCTGAATCTTACTTACCCAGAAACAGTTACCCCATATAACATTGAAAGGCTGAAGGAGCTCGTTGAATATGGGCCACATCCTCCTCCTGGAAAGGCCGGTGCCAAATATATCATAAGAGATGATGGGCAAAGGCTAGATCTTCGGTACCTTAAAAAGAGCAGTGATCACCATTTGGAACTTGGATATAAAGTGGAGCGACATTTGCAGGATGGTGATTTTGTTCTTTTCAATCGTCAGCCGAGTCTGCACAAAATGTCCATTATGGGCCACAGAATTAGGATTATGCCGTACTCCACATTTCGCCTGAATTTGTCTGTCACCTCTCCGTACAATGCTGATTTTGATGGTGATGAAATGAACATGCATGTCCCACAGTCGTTTGAGACTAGAGCAGAAGTGTTGGAGCTGATGATGGTTCCTAAATGTATCGTTTCTCCTCAGTCGAATAGGCCTGTGATGGGTATTGTGCAGGATACGCTTCTAGGGTGCCGTAAAATCACTAAGAGGGACACCTTCATCGAGAAGGACGTGTTCATGAACATACTTATGTGGTGGGAAGACTTCGACGGAAAAGTTCCAGCTCCTGCAATTTTGAAACCGCGTCCTCTTTGGACTGGCAAACAAGTTTTCAATCTTATAATACCAAAACAGATAAATTTGTTGCGATTTTCTGCGTGGCACTCGGATCAAGAGACTGGATTCATAACTCCAGGGGATACTCAAGTGCGGATTGAAAGAGGCGAGCTTCTTGCTGGGACTCTTTGCAAAAAGACGCTTGGGACGTCTACTGGAAGTCTTGTTCATGTCATTTGGGAAGAGGTTGGTCCAGATGCAGCTAGAAAGTTCTTGGGTCATACTCAGTGGCTTGTCAATTACTGGCTTTTGCAAAATGGTTTTACTATCGGGATTGGTGACACGATTGCTGACTCAGCAACTATGGAGAAAATTAACGAAACTATTTCTAACGCAAAGAATGCTGTGAAAGATCTTATCCGGCAGTTCCAGGAAAAGAAATTAGACCCTGAACCAGGACGAACAATGACGGAGACTTTTGAAAACAGGGTTAACCAGGTGTTGAATAAAGCTCGTGATGATGCTGGAAGCAGTGCTCAGAAGAGTTTGGCAGAGACCAACAATCTTAAGGCCATGGTTACAGCAGGATCCAAAGGAAGTTTCATTAATATTTCTCAAATGACAGCATGTGTCGGCCAGCAGAATGTGGAAGGGAAGCGGATCCCATTTGGTTTTATAGGGCGGACATTGCCCCATTTCACCAAAGATGATTATGGTCCTGAAAGTCGAGGATTTGTCGAGAACTCGTACCTGCGAGGATTGACCCCTCAAGAGTTCTTTTTCCATGCGATGGGAGGAAGGGAAGGTCTTATTGATACTGCTGTGAAGACCTCTGAAACTGGGTATATCCAGAGGCGATTGGTTAAGGCTATGGAGGATATTATGGTTAAGTATGACGGTACAGTCAGGAACTCCTTGGGTGATGTTATTCAATTTCTCTATGGGGAAGATGGTATGGATGCTGTGTGGATTGAGTCACAGAAGCTAGATTCCCTGAAAATGAAAAAGTTTGAGTTCGATAGGACTTTCAAGTACGAGATCGATGATGAAAACTGGAACCCAACTTACCTAAGTGATGAGCATCTCGAAGATCTGAAAGGGATCCGGGAGTTGCGTGATGTTTTTGATGCGGAATATCAGAAACTTGAAGCTGACAGGTTTCAACTCGGGACAGAAATTGCAACGAATGGTGATAGTACTTGGCCATTGCCCGTTAACATCAAGAGACATATCTGGAATGCACAGAAGACCTTCAAGATTGACTTGAGGAAGATTTCAGACATGCATCCGGTTGAAATAGTCGATGCCGTCGATAAACTGCAGGAGAGGCTGTCGGTTGTCCCGGGAGATGATCCATTGAGTGTGGAAGCACAGAAGAACGCTACTCTATTTTTCAACATTCTACTTCGTAGTACTCTTGCGAGTAAACGGGTTTTGGAGGAATACAAGCTCAGCCGTGAGGCTTTCGAATGGGTTATCGGTGAGATCGAATCAAGATTTCTACAATCGTTAGTTGCGCCCGGGGAAATGATTGGTTGTGTTGCTGCTCAATCAATCGGAGAACCTGCCACTCAGATGACTCTGAATACATTCCACTATGCTGGTGTGAGTGCCAAGAACGTTACCCTTGGTGTTCCCAGGTTGAGGGAGATTATTAATGTAGCTAAAAGGATTAAAACACCTTCTCTATCTGTCTACCTCGGGCCTGAACCTAGTAAGACAAAAGAAGGGGCTAAAACCGTTCAATGTGCTTTGGAATATACTACTCTCAGGAGTGTCACTCAAGCTACGGAAGTTTGGTATGACCCGGATCCAATGAGTACAATTATAGAAGAGGACCTTGACTTTGTCAGGTCCTACTATGAGATGCCTGACGAAGATGTTTCTCCGGACAAGATATCTCCATGGCTGCTGCGTATTGAGTTGAATCGTGAGATGATGGTTGATAAGAAGTTGAGTATGGCCGATATCGCCGAGAAGATCAATCTTGAATTTGACGATGACCTGACTTGTATTTTCAATGATGACAATGCTCAAAAACTCATCCTACGGATCCGCATCATGAATGATGAGGCTCCGAAGGGGGAGCTGCAAGATGAATCGGCTGAAGATGACGTTTTCCTCAAAAAGATTGAGAGCAACATGCTTACTGAAATGGCTCTCAGAGGCATTCCAGACATTAACAAGGTTTTCATTAAACAGGTCAGAAAGAGCCGGTTTGATGAGCAAGATGGATTCAAGACGTCAGAGGAGTGGATGTTAGATACAGAAGGTGTTAATCTCTTAGCTGTTATGTGCCACGAAGATGTGGATCCGAAGAGGACGACGAGCAATCACTTGATTGAAATCATCGAAGTTCTTGGAATCGAGGCAGTTCGTCGAGCTTTGTTGGATGAACTGCGTGTTGTGATATCCTTTGATGGATCTTATGTGAACTACCGCCATCTCGCCATCTTGTGTGATACCATGACTTATCGTGGCCATCTAATGGCAATCACTCGACATGGTATCAATCGAAATGACACTGGGCCACTGATGAGATGCTCTTTCGAAGAAACAGTGGATATTCTTTTGGATGCTGCCGCCTATGCTGAGACAGATTGCTTACGGGGTGTTACCGAAAATATAATGCTGGGCCAACTTGCCCCGATCGGGACTGGGGATTGTGAACTGTATTTGAACGATGCGATGCTGAAGAATGCAATCGAACTGCAACTCCCCAGTTATATGGATGGTCTGGAGTTTGGGATGACGCCTGCTCGTTCACCAGTGTCGGGAACTCCTTACCATGAGGGAATGATGTCTCCGAGCTACATGCTGAGTCCTAATTTTCGTTTGTCGCCAATCTCAGATGCTCAGTTCTCTCCTTACGTTGGTGGAATGGCCTTTTCGCCCTCTTCATCTCCTGGCTATAGCCCGTCATCACCTGGATATAGCCCGACCTCCCCTGGTTATAGCCCTACTTCACCTGGATACAGCCCGACGTCTCCAGGATACAGTCCCACTTCGCCTACTTACAGTCCGAGTTCTCCCGGCTATAGTCCAACAAGCCCGGCTTATTCTCCTACGAGTCCATCTTATTCTCCCACCTCTCCAAGTTACAGCCCTACATCTCCAAGCTACAGTCCGACATCCCCGAGCTACAGCCCGACATCCCCGAGCTACAGCCCGACTTCCCCGAGTTACAGCCCGACTTCTCCCACTTACAGTCCGACTTCTCCTGCTTATAGCCCGACTTCACCTGCATACAGTCCCACCTCTCCCTCTTACAGCCCAACCTCACCCTCTTACAGCCCGACATCCCCTTCTTACAGCCCTACTTCGCCTTCATACAGTCCCACATCGCCGTCTTACAGCCCTACTTCACCTGCATATAGCCCTACATCTCCTGGCTACAGCCCGGCTTCACCAAGTTACAGTCCAACATCGCCGAGTTATGGTAATACTTCACCGAGCTACAACCCGCAGTCGGCTAAATACAGTCCATCTCTAGCGTACTCTCCCAGTAACGCGAGGTTGTCGCCATCCAGTCCTTACAGTCCTACATCACCAAACTATAGCCCAACATCTCCATCATATTCACCGACATCTCCATCTTATTCTCCTTCAAGCCCGACTTACAGCCCTAGCAGTCCATACAGCTCGGGGGCGAGCCCTGACTACAGCCCAAGTGCCGGATACTCGCCAACGCTTCCGGGGTACTCGCCATCGTCGACTGGTCAGTACACACCACATGAGGGTGAGAAAGAGGACAAGACTCAGAAAGACAGACAGGCTGGTAAGGATGATAAATAA
Protein:  
MDTRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHSETTEKGKPKIGGLSDPRLGTIDRKVKCETCMANMAECSGHFGHLELAKPMFHVGFLKIVLSIMRCVCFNCSKILADEEDHKFKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVHNQDTDEPVKKSRGGCGAQQPKLTIEGMKMIAEYKAQRKKNDDQDQLPEPAERKQTLGADRVLSVLKRISDEDCQLLGFNPKYARPDWMILQVLPIPPPPVRPSVMMDATARSEDDLTHQLAMIIRHNENLKKQEKNGAPAHIISEFTQLLQFHIATYFDNELPGQPRATQKSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKAGAKYIIRDDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRFSAWHSDQETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLVHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFTIGIGDTIADSATMEKINETISNAKNAVKDLIRQFQEKKLDPEPGRTMTETFENRVNQVLNKARDDAGSSAQKSLAETNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQKLDSLKMKKFEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIRELRDVFDAEYQKLEADRFQLGTEIATNGDSTWPLPVNIKRHIWNAQKTFKIDLRKISDMHPVEIVDAVDKLQERLSVVPGDDPLSVEAQKNATLFFNILLRSTLASKRVLEEYKLSREAFEWVIGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLGPEPSKTKEGAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDLDFVRSYYEMPDEDVSPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAQKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQVRKSRFDEQDGFKTSEEWMLDTEGVNLLAVMCHEDVDPKRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAAYAETDCLRGVTENIMLGQLAPIGTGDCELYLNDAMLKNAIELQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPSYMLSPNFRLSPISDAQFSPYVGGMAFSPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPTYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPASPSYSPTSPSYGNTSPSYNPQSAKYSPSLAYSPSNARLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSAGYSPTLPGYSPSSTGQYTPHEGEKEDKTQKDRQAGKDDK